SCCmec IV subtypes list
|
SCCmec IV subtype |
Representative strain (GenBank accession No.) |
Source |
Country |
No. of isolates |
Reported in |
Subtyping by |
Reference articles |
|
a |
CA05(AB063172) |
human |
Japan |
1 |
2002 |
J1 |
DOI: 10.1128/AAC.46.4.1147–1152.2002 |
|
b |
8/6-3P (AB063173) |
human |
Japan |
1 |
2002 |
J1 |
DOI: 10.1128/AAC.46.4.1147–1152.2002 |
|
c |
81/108 (AB096217) |
human |
Japan |
44 |
2004 |
J1 |
doi:10.1128/JCM.00985-06 |
|
d |
JCSC4469 (AB097677) |
human |
Japan |
10 |
2004 |
J1 |
doi:10.1128/JCM.00985-06 |
|
E |
AR43/3330.1 (AJ810121.1) |
human |
Ireland |
17 |
2005 |
J3 |
doi:10.1128/AAC.49.5.2070–2083.2005 |
|
F |
No strain/accession number found in GenBank |
human |
Ireland |
3 |
2005 |
J3 |
doi:10.1128/AAC.49.5.2070–2083.2005 |
|
g |
M03-68 (DQ106887) |
bovine milk |
Korea |
4 |
2005 |
J1 |
doi:10.1093/jac/dki306 |
|
h |
in HO 5096 0412(EMRSA15) (HE681097) |
human |
Portugal, Greece, Finland |
7 |
2007 |
J1 |
doi:10.1093/jac/dkm112 |
|
i |
JCSC6668 (=CCUG41764)(AB425823) |
human |
Sweden |
1 |
2009 |
J1 |
doi:10.1093/jac/dkn435 |
|
j |
JCSC6670 (=CCUG27050) (AB425824) |
human |
Sweden |
1 |
2009 |
J1 |
doi:10.1093/jac/dkn435 |
|
k |
45394F(GU122149) |
human? |
Netherlands |
1 |
2010 |
J1 |
Unpublished? |
|
l |
NN50 (AB633329) |
human |
Japan |
29 |
2012 |
J1 |
DOI 10.1007/s10156-011-0348-5 |
|
m |
JCSC8843 (AB872254) |
human |
Japan |
1 |
2014 |
J1 |
DOI: 10.11150/kansenshogakuzasshi.88.840 [Japanese] |
|
n |
JDK6519 (KX385846.1) |
human |
Australia |
12 |
2018 |
J3 |
doi: 10.3389/fmicb.2018.01453 |
|
o |
No strain/accession number found in NCBI |
human |
Australia |
19 |
2018 |
J3 |
DOI: 10.1016/j.cmi.2018.04.020 |